STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP42285.1Branched-chain amino acid ABC transporter. (103 aa)    
Predicted Functional Partners:
ALP43191.1
Putative branched-chain amino acid transport protein, AzlC family.
 
  
 0.988
ALP41340.1
AraC family transcriptional regulator.
 
     0.821
ompK
Membrane protein.
  
     0.524
ALP39677.1
Membrane protein.
  
     0.482
WL1483_13
Glyoxalase family protein.
  
     0.465
ALP39837.1
Hypothetical protein.
  
     0.439
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
       0.437
ALP42298.1
Zn-ribbon-containing protein.
  
     0.426
ALP43745.1
Hypothetical protein.
  
     0.423
ALP42451.1
Hypothetical protein.
  
     0.406
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.