STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP42296.1Transporter binding protein. (581 aa)    
Predicted Functional Partners:
sapC
Peptide ABC transporter permease SapC.
  
     0.745
sapB
Peptide ABC transporter permease.
  
     0.733
ALP42631.1
Peptide ABC transporter permease.
  
     0.701
ALP41168.1
Peptide ABC transporter permease.
  
     0.681
ALP42078.1
Dipeptide transport system permease DppC.
  
     0.680
ALP41472.1
Peptide ABC transporter permease.
  
     0.673
oppD
Peptide ABC transporter ATPase; Belongs to the ABC transporter superfamily.
  
     0.650
appF
Oligopeptide transport ATP-binding protein AppF; Belongs to the ABC transporter superfamily.
  
     0.645
sapD
Peptide ABC transporter ATP-binding protein SapD; Belongs to the ABC transporter superfamily.
  
     0.638
oppC
Oligopeptide ABC transporter permease.
  
     0.634
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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