STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prrGamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (476 aa)    
Predicted Functional Partners:
davT
4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.936
ALP42242.1
Twin-arginine translocation pathway signal.
   
 
 0.916
puuC
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.913
ALP39705.1
Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 0.903
putA
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
0.885
gltB
Glutamate synthase subunit alpha.
  
 
 0.882
ALP40411.1
Group II decarboxylase.
   
 0.820
ydcV
ABC transporter permease.
 
  
 0.816
gltD
Glutamate synthase subunit beta.
    
 0.812
gdhB
NAD-glutamate dehydrogenase.
  
 
  0.808
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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