STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btuCVitamin B12 import system permease BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (318 aa)    
Predicted Functional Partners:
ALP41551.1
ABC transporter substrate-binding protein.
 
 
 0.997
btuD
Vitamin B12 import ATP-binding protein BtuD.
 
  
 0.988
ALP42763.1
ABC transporter substrate-binding protein.
 
 
 
 0.895
fhuC
Iron ABC transporter ATP-binding protein.
 
   
 0.791
fecE
Iron ABC transporter.
 
   
 0.787
hmuV
Hemin ABC transporter ATP-binding protein HutD; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
  
     0.771
ALP41170.1
Hemin receptor.
  
   
 0.769
ALP43128.1
Extracellular solute-binding protein; Belongs to the bacterial solute-binding protein 3 family.
       0.613
ALP40644.1
Transmembrane signal peptide protein.
       0.442
btuB
TonB-dependent vitamin B12 receptor; Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans- periplasmic membrane protein TonB; Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily.
 
   
 0.431
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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