Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ALP42561.1TetR family transcriptional regulator. (190 aa)    
Predicted Functional Partners:
ALP41923.1
Hypothetical protein.
       0.787
calB
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.779
ALP41289.1
Alcohol dehydrogenase IV.
       0.778
ALP42638.1
TetR family transcriptional regulator.
  
     0.743
ALP40700.1
DNA-binding protein; Belongs to the UPF0251 family.
       0.592
ALP43731.1
Hypothetical protein.
 
     0.532
ALP39731.1
Hypothetical protein.
       0.473
WL1483_48
Hypothetical protein.
       0.459
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.448
ALP42500.1
TetR family transcriptional regulator.
  
     0.423
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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