Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALP39762.1 | ALP42963.1 | WL1483_343 | WL1483_3544 | TPR-repeat-containing protein. | Hypothetical protein. | 0.430 |
ALP39762.1 | rpoA | WL1483_343 | WL1483_2142 | TPR-repeat-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.758 |
ALP39762.1 | rpoB | WL1483_343 | WL1483_1578 | TPR-repeat-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.709 |
ALP39762.1 | rpoZ | WL1483_343 | WL1483_3447 | TPR-repeat-containing protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.696 |
ALP39762.1 | yhgF | WL1483_343 | WL1483_3190 | TPR-repeat-containing protein. | Paral putative RNase R. | 0.647 |
ALP41949.1 | rpoA | WL1483_2530 | WL1483_2142 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.758 |
ALP41949.1 | rpoB | WL1483_2530 | WL1483_1578 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.707 |
ALP41949.1 | rpoZ | WL1483_2530 | WL1483_3447 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.696 |
ALP41949.1 | yhgF | WL1483_2530 | WL1483_3190 | Hypothetical protein. | Paral putative RNase R. | 0.647 |
ALP42352.1 | rpoA | WL1483_2933 | WL1483_2142 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.758 |
ALP42352.1 | rpoB | WL1483_2933 | WL1483_1578 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.709 |
ALP42352.1 | rpoZ | WL1483_2933 | WL1483_3447 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.696 |
ALP42352.1 | yhgF | WL1483_2933 | WL1483_3190 | Hypothetical protein. | Paral putative RNase R. | 0.647 |
ALP42963.1 | ALP39762.1 | WL1483_3544 | WL1483_343 | Hypothetical protein. | TPR-repeat-containing protein. | 0.430 |
ALP42963.1 | rpoA | WL1483_3544 | WL1483_2142 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.758 |
ALP42963.1 | rpoB | WL1483_3544 | WL1483_1578 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.707 |
ALP42963.1 | rpoZ | WL1483_3544 | WL1483_3447 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.696 |
ALP42963.1 | yhgF | WL1483_3544 | WL1483_3190 | Hypothetical protein. | Paral putative RNase R. | 0.647 |
ALP43626.1 | rpoA | WL1483_4207 | WL1483_2142 | Von Willebrand factor type A domain-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.758 |
ALP43626.1 | rpoB | WL1483_4207 | WL1483_1578 | Von Willebrand factor type A domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.709 |
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