Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALP41881.1 | ALP42841.1 | WL1483_2462 | WL1483_3422 | Thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | Hypothetical protein. | 0.641 |
ALP41881.1 | ALP43281.1 | WL1483_2462 | WL1483_3862 | Thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | Hypothetical protein. | 0.594 |
ALP42841.1 | ALP41881.1 | WL1483_3422 | WL1483_2462 | Hypothetical protein. | Thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | 0.641 |
ALP42841.1 | ALP43281.1 | WL1483_3422 | WL1483_3862 | Hypothetical protein. | Hypothetical protein. | 0.773 |
ALP42841.1 | rplI | WL1483_3422 | WL1483_2029 | Hypothetical protein. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.658 |
ALP42841.1 | rplV | WL1483_3422 | WL1483_1514 | Hypothetical protein. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.693 |
ALP42841.1 | rpmB | WL1483_3422 | WL1483_1761 | Hypothetical protein. | 50S ribosomal protein L28. | 0.620 |
ALP42841.1 | rpmC | WL1483_3422 | WL1483_1364 | Hypothetical protein. | 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.662 |
ALP42841.1 | rpmF | WL1483_3422 | WL1483_2832 | Hypothetical protein. | 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.669 |
ALP42841.1 | rpsG | WL1483_3422 | WL1483_2203 | Hypothetical protein. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.629 |
ALP42841.1 | rpsJ | WL1483_3422 | WL1483_3269 | Hypothetical protein. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.625 |
ALP42841.1 | rpsN | WL1483_3422 | WL1483_2565 | Hypothetical protein. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.620 |
ALP43281.1 | ALP41881.1 | WL1483_3862 | WL1483_2462 | Hypothetical protein. | Thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | 0.594 |
ALP43281.1 | ALP42841.1 | WL1483_3862 | WL1483_3422 | Hypothetical protein. | Hypothetical protein. | 0.773 |
rplI | ALP42841.1 | WL1483_2029 | WL1483_3422 | 50S ribosomal protein L9; Binds to the 23S rRNA. | Hypothetical protein. | 0.658 |
rplI | rplV | WL1483_2029 | WL1483_1514 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.993 |
rplI | rpmB | WL1483_2029 | WL1483_1761 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L28. | 0.991 |
rplI | rpmC | WL1483_2029 | WL1483_1364 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.990 |
rplI | rpmF | WL1483_2029 | WL1483_2832 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.988 |
rplI | rpsG | WL1483_2029 | WL1483_2203 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.991 |
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