STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP42959.1Hypothetical protein. (82 aa)    
Predicted Functional Partners:
ALP41286.1
anti-sigma-D factor.
  
     0.585
ALP43161.1
Hypothetical protein.
  
     0.566
rlmG
Ribosomal RNA large subunit methyltransferase G; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.
  
     0.556
ALP43717.1
TetR family transcriptional regulator.
  
     0.462
ALP42207.1
Hypothetical protein; Belongs to the UPF0149 family.
 
     0.453
ALP40429.1
Peptidoglycan hydrolase.
  
     0.436
ALP43608.1
Hypothetical protein.
 
     0.424
ALP41815.1
Hypothetical protein.
  
     0.419
ALP39919.1
Motility protein FimV.
  
     0.418
ALP40640.1
TrmH family RNA methyltransferase.
  
     0.409
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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