STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copACopper-translocating P-type ATPase. (787 aa)    
Predicted Functional Partners:
zntA
Zinc ABC transporter ATPase.
 
 
0.896
ALP42869.1
Copper-transporting ATPase Ran1.
 
 
0.894
ALP40735.1
Cation transporter E1-E2 family ATPase.
 
 
0.891
hmrR
Cu(I)-responsive transcriptional regulator.
  
  
 0.856
ALP39628.1
Hypothetical protein.
  
  
 0.721
ALP40420.1
DPS family protein; Belongs to the Dps family.
  
  
 0.683
ALP40947.1
Cation efflux family protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
 
 0.620
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
  
 
 0.584
ygaV
Nodulation protein NolR.
  
  
 0.566
ALP39760.1
Arsenic operon regulator.
  
  
 0.566
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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