STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompKMembrane protein. (272 aa)    
Predicted Functional Partners:
lamB
Maltoporin.
  
   
 0.729
ALP40180.1
Outer membrane porin.
  
  
 0.610
luxR
LitR, transcriptional regulator.
  
     0.558
ALP42298.1
Zn-ribbon-containing protein.
  
     0.547
ALP42799.1
Hypothetical protein.
  
     0.542
ALP40427.1
Hypothetical protein; Belongs to the UPF0319 family.
  
     0.530
ALP42285.1
Branched-chain amino acid ABC transporter.
  
     0.524
ALP39670.1
Lipoprotein.
 
     0.515
zapB
Cell division protein zapB; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.
  
     0.512
ALP41036.1
Muropeptide permease AmpG.
       0.508
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.