Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALP39793.1 | ALP40113.1 | WL1483_374 | WL1483_694 | Hypothetical protein. | Hypothetical protein. | 0.813 |
ALP39793.1 | ALP41039.1 | WL1483_374 | WL1483_1620 | Hypothetical protein. | Tmao reductase sytem sensor tors. | 0.917 |
ALP39793.1 | ALP42102.1 | WL1483_374 | WL1483_2683 | Hypothetical protein. | Hypothetical protein. | 0.855 |
ALP39793.1 | ALP42534.1 | WL1483_374 | WL1483_3115 | Hypothetical protein. | Chemotaxis protein CheY. | 0.813 |
ALP39793.1 | arcB | WL1483_374 | WL1483_942 | Hypothetical protein. | Aerobic respiration control sensor protein ArcB. | 0.867 |
ALP39793.1 | barA | WL1483_374 | WL1483_2664 | Hypothetical protein. | Hybrid sensory histidine kinase BarA. | 0.874 |
ALP39793.1 | mglA2 | WL1483_374 | WL1483_3908 | Hypothetical protein. | Sugar ABC transporter ATP-binding protein. | 0.717 |
ALP39793.1 | rbsA | WL1483_374 | WL1483_860 | Hypothetical protein. | D-ribose transporter ATP binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | 0.717 |
ALP39793.1 | rbsC | WL1483_374 | WL1483_411 | Hypothetical protein. | Ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.810 |
ALP39793.1 | rbsD | WL1483_374 | WL1483_1372 | Hypothetical protein. | D-ribose-binding protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.797 |
ALP40113.1 | ALP39793.1 | WL1483_694 | WL1483_374 | Hypothetical protein. | Hypothetical protein. | 0.813 |
ALP40113.1 | ALP41039.1 | WL1483_694 | WL1483_1620 | Hypothetical protein. | Tmao reductase sytem sensor tors. | 0.966 |
ALP40113.1 | ALP42102.1 | WL1483_694 | WL1483_2683 | Hypothetical protein. | Hypothetical protein. | 0.966 |
ALP40113.1 | ALP42534.1 | WL1483_694 | WL1483_3115 | Hypothetical protein. | Chemotaxis protein CheY. | 0.823 |
ALP40113.1 | arcB | WL1483_694 | WL1483_942 | Hypothetical protein. | Aerobic respiration control sensor protein ArcB. | 0.973 |
ALP40113.1 | barA | WL1483_694 | WL1483_2664 | Hypothetical protein. | Hybrid sensory histidine kinase BarA. | 0.973 |
ALP41039.1 | ALP39793.1 | WL1483_1620 | WL1483_374 | Tmao reductase sytem sensor tors. | Hypothetical protein. | 0.917 |
ALP41039.1 | ALP40113.1 | WL1483_1620 | WL1483_694 | Tmao reductase sytem sensor tors. | Hypothetical protein. | 0.966 |
ALP41039.1 | ALP42102.1 | WL1483_1620 | WL1483_2683 | Tmao reductase sytem sensor tors. | Hypothetical protein. | 0.974 |
ALP41039.1 | ALP42534.1 | WL1483_1620 | WL1483_3115 | Tmao reductase sytem sensor tors. | Chemotaxis protein CheY. | 0.965 |
page 1 of 3