STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP43242.1Glutamate synthase. (545 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase subunit alpha.
 
 0.999
nifJ
Ferredoxin oxidoreductase.
 
 
 0.999
nuoF
NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
    
 0.909
ycbX
Flavodoxin reductase family 1 protein.
   
 0.831
ALP43348.1
Hypothetical protein.
  
 
 0.787
fre
FMN reductase.
  
 
 0.787
etfB
Electron transporter RnfB.
   
 
 0.774
ygfK
Selenate reductase subunit YgfK.
 
 
0.766
ALP43227.1
Iron-sulfur cluster-binding protein.
   
 0.751
yfaE
Iron-sulfur cluster binding protein.
    
 0.699
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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