STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP43403.1Peptide synthetase. (487 aa)    
Predicted Functional Partners:
entB
Isochorismatase.
 
  
 0.994
entE
Enterobactin synthase subunit E.
  
0.976
hemL
Glutamate-1-semialdehyde aminotransferase.
  
 
 0.952
ddl
D-alanyl-alanine synthetase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
     
 0.916
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
 0.916
ALP41341.1
Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      0.905
amoA
Isochorismate synthase.
 
  
 0.904
entA
2, 3-dihydroxybenzoate-2, 3-dehydrogenase.
 
 0.864
ALP42990.1
Non-ribosomal peptide synthetase.
 
    
0.831
ALP43225.1
Short-chain alcohol dehydrogenase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      0.809
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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