Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
braCLeucine ABC transporter subunit substrate-binding protein LivK. (359 aa)    
Predicted Functional Partners:
livM
Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
braF
Leucine/isoleucine/valine transporter ATP-binding subunit.
 
 
 0.998
livH
High-affinity branched-chain amino acid transport system permeaseprotein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
livF
Branched-chain amino acid ABC transporter ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.996
ALP40683.1
Histidine kinase.
  
 
 0.827
gltB
Glutamate synthase subunit alpha.
     
 0.555
arcB
Aerobic respiration control sensor protein ArcB.
   
 
 0.475
barA
Hybrid sensory histidine kinase BarA.
   
 
 0.423
ALP42115.1
Hypothetical protein.
     
 0.419
glpG
GlpG protein.
  
    0.412
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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