STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
braCLeucine ABC transporter subunit substrate-binding protein LivK. (359 aa)    
Predicted Functional Partners:
livM
Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
braF
Leucine/isoleucine/valine transporter ATP-binding subunit.
 
 
 0.998
livH
High-affinity branched-chain amino acid transport system permeaseprotein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
livF
Branched-chain amino acid ABC transporter ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.996
ALP40683.1
Histidine kinase.
  
 
 0.846
rpmE
50S ribosomal protein L31; Binds the 23S rRNA.
  
    0.630
ALP40028.1
NADH dehydrogenase.
  
  
 0.585
hisI
Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; In the N-terminal section; belongs to the PRA-CH family.
  
    0.539
gltB
Glutamate synthase subunit alpha.
     
 0.509
glpE
Thiosulfate sulfurtransferase GlpE; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
  
    0.469
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.