STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP43589.1Peptide ABC transporter ATP-binding protein. (212 aa)    
Predicted Functional Partners:
ALP42631.1
Peptide ABC transporter permease.
 
  
 0.948
ALP41268.1
Nickel ABC transporter substrate-binding protein.
 
  
 0.946
ALP41892.1
Peptide ABC transporter ATP-binding protein.
   
0.938
ALP41472.1
Peptide ABC transporter permease.
 
  
 0.926
hybE
Hydrogenase biosynthesis protein HybE.
 
     0.641
btuD
Vitamin B12 import ATP-binding protein BtuD.
  
     0.615
ALP43290.1
Peptide ABC transporter permease.
 
  
 0.615
hybB
Hydrogenase 2 b cytochrome subunit.
 
     0.586
ALP42078.1
Dipeptide transport system permease DppC.
  
  
 0.561
oppC
Oligopeptide ABC transporter permease.
 
  
 0.561
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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