STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP43751.1PTS beta-glucoside transporter subunit IIBC. (418 aa)    
Predicted Functional Partners:
ALP40668.1
PTS ascorbate transporter subunit IIB.
 
 
 0.996
cmtB
PTS system mannitol-specific transporter subunit IIA.
 
 
 0.995
ptsH
PTS sugar transporter.
    
 0.905
ALP40028.1
NADH dehydrogenase.
   
    0.819
hisI
Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; In the N-terminal section; belongs to the PRA-CH family.
   
    0.776
ALP42168.1
Transcription antiterminator BglG.
 
  
 0.756
rpmE
50S ribosomal protein L31; Binds the 23S rRNA.
   
    0.752
ALP42034.1
PTS fructose transporter subunit IIA.
 
  
 0.713
manP
PTS fructose transporter subunit IIC.
 
  
 0.690
ribE
Riboflavin synthase subunit alpha.
   
    0.680
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.