STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
calBAldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (474 aa)    
Predicted Functional Partners:
ALP41289.1
Alcohol dehydrogenase IV.
 
 
 0.812
ALP41923.1
Hypothetical protein.
       0.781
ALP42561.1
TetR family transcriptional regulator.
       0.781
ALP39617.1
Proline sensor PrlS.
  
 
 0.608
ALP40700.1
DNA-binding protein; Belongs to the UPF0251 family.
       0.592
ALP41488.1
Long-chain-fatty-acid--luciferin-component ligase, Acyl-protein synthase.
   
 
 0.578
WL1483_48
Hypothetical protein.
  
    0.501
pckA
Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
  
  
 0.482
prpC
2-methylcitrate synthase; Belongs to the citrate synthase family.
  
 
 0.478
prpD
2-methylcitrate dehydratase.
  
 
 0.478
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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