STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP42298.1Zn-ribbon-containing protein. (256 aa)    
Predicted Functional Partners:
WL1483_86
Hypothetical protein.
  
     0.767
ALP42451.1
Hypothetical protein.
  
     0.756
ALP43745.1
Hypothetical protein.
  
     0.721
ALP41815.1
Hypothetical protein.
 
     0.719
ALP43373.1
Hypothetical protein.
       0.716
ALP40834.1
Hypothetical protein.
       0.667
ALP41693.1
Protein of hypothetical protein function DUF6, transmembrane.
       0.639
ALP40179.1
Cytochrome c oxidase, cbb3-type, CcoQ subunit.
  
     0.587
exeN
Type II secretion system protein N.
  
     0.569
ALP43126.1
Putative SerB-cotransposed membrane protein.
  
     0.569
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.