STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP43723.1Glycosyltransferase. (268 aa)    
Predicted Functional Partners:
ALP43480.1
ADP-heptose--LPS heptosyltransferase.
  
 0.888
ALP43256.1
Heptosyltransferase.
 
  
 0.705
rfaF
ADP-heptose-LPS heptosyltransferase II.
 
  
 0.689
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
   
 0.687
malZ
Maltodextrin glucosidase; Belongs to the glycosyl hydrolase 13 family.
       0.639
WL1483_15
Maltodextrin glucosidase.
       0.579
ALP42241.1
Hypothetical protein.
       0.579
arnA
Bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase.
 
 
 0.562
ALP41615.1
Polysaccharide deacetylase.
 
 
 0.536
opsX
ADP-heptose--LPS heptosyltransferase III.
 
  
 0.532
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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