STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exeBGeneral secretion pathway protein GspB. (231 aa)    
Predicted Functional Partners:
exeA
General secretion pathway protein A.
 
     0.874
ALP41394.1
Hypothetical protein.
  
     0.734
ALP41610.1
Phospholipase A1.
  
     0.711
ALP42019.1
Hypothetical protein.
  
     0.698
ALP41424.1
Outer membrane protein.
  
     0.654
ALP43684.1
Hypothetical protein.
  
     0.653
ALP40560.1
MSHA biogenesis protein MshO.
  
     0.652
ALP43675.1
MSHA biogenesis protein MshN/MshD.
  
     0.642
mutY
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.636
mltC
Murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.
       0.632
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.