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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
ALP39964.1OmpA family protein. (278 aa)    
Predicted Functional Partners:
motC
MotA/TolQ/ExbB proton channel.
 
 0.997
pomA
Chemotaxis protein PomA.
 
 0.992
lafT
LafT.
  
 0.981
cheA
Chemotaxis protein CheA.
 
  
 0.931
motB
Flagellar motor protein MotB.
  
  
 
0.926
lafU
LafU.
     
 0.905
cheZ
Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
  
  
 0.868
ALP43714.1
Hypothetical protein.
  
  
 0.866
ALP43372.1
CheW-like protein.
 
  
 0.865
ALP40818.1
CheV.
  
  
 0.849
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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