STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP39980.1Cytochrome oxidase maturation protein, cbb3-type. (56 aa)    
Predicted Functional Partners:
ALP41462.1
Hypothetical protein.
 
     0.921
ALP40735.1
Cation transporter E1-E2 family ATPase.
 
  
 0.902
ALP40179.1
Cytochrome c oxidase, cbb3-type, CcoQ subunit.
 
  
 0.862
ALP43692.1
Hypothetical protein.
 
     0.858
ccoP2
Cytochrome c oxidase, cbb3-type subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.825
ALP39584.1
Cbb3-type cytochrome c oxidase subunit II.
 
  
 0.778
fixN
Cbb3-type cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.741
fnr
Fumarate/nitrate reduction transcriptional regulator.
 
    0.692
ALP41078.1
Hypothetical protein.
  
     0.642
exeB
General secretion pathway protein GspB.
  
     0.609
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.