STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP40019.1Small conductance mechanosensitive Ion channel (MscS) family protein. (1083 aa)    
Predicted Functional Partners:
ALP42863.1
Glycerophosphoryl diester phosphodiesterase.
       0.773
ALP40180.1
Outer membrane porin.
  
     0.611
ALP39782.1
Hemerythrin HHE cation binding domain-containing protein.
  
     0.580
ALP40068.1
Outer membrane protein C.
  
     0.501
ALP41597.1
Hypothetical protein; Belongs to the UPF0265 family.
  
     0.499
ALP43701.1
MATE efflux family protein.
       0.489
glpG
GlpG protein.
  
     0.481
ALP42009.1
Methyl-accepting chemotaxis protein.
       0.480
yhgN
Multiple antibiotic resistance (MarC)-like protein.
  
    0.414
ALP39949.1
Hypothetical protein.
  
    0.414
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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