Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
WL1483_64C4-dicarboxylate transporter signal transduction histidine kinase. (590 aa)    
Predicted Functional Partners:
dctD
C4-dicarboxylate ABC transporter.
 0.992
dctP
C4-dicarboxylate ABC transporter.
 
   
 0.649
ALP41360.1
C4-dicarboxylate ABC transporter permease.
 
     0.633
fhlA
ATPase AAA.
   
 
 0.616
arcB
Aerobic respiration control sensor protein ArcB.
  
 
 0.598
ALP40376.1
enoyl-CoA hydratase/isomerase.
       0.581
ALP40828.1
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
   
    0.565
ALP42654.1
Flagellar basal body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
   
    0.565
ALP42010.1
C4-dicarboxylate ABC transporter permease.
 
     0.552
barA
Hybrid sensory histidine kinase BarA.
  
 
 0.541
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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