STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP40071.1Lipoprotein. (184 aa)    
Predicted Functional Partners:
ALP40502.1
Plasmid partition ParA protein.
 
  
 0.932
ALP43545.1
Hypothetical protein.
 
   
 0.922
ALP42415.1
FAD-dependent oxidoreductase.
 
   
 0.889
ALP41443.1
Short chain dehydrogenase/reductase family oxidoreductase.
 
    0.880
ALP40405.1
Transcriptional regulator.
 
     0.852
ALP39834.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
   
 0.820
ALP43742.1
Hypothetical protein.
 
     0.768
ALP40420.1
DPS family protein; Belongs to the Dps family.
       0.648
phrB
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
  
 0.560
yajC
Preprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
    
 
 0.446
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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