STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
entEEnterobactin synthase subunit E. (541 aa)    
Predicted Functional Partners:
entB
Isochorismatase.
 
 0.999
entA
2, 3-dihydroxybenzoate-2, 3-dehydrogenase.
 
 0.996
amoA
Isochorismate synthase.
 
  
 0.989
ALP43403.1
Peptide synthetase.
  
0.976
ALP43721.1
Peptide synthetase.
  
0.973
ALP42990.1
Non-ribosomal peptide synthetase.
 
  
0.958
entD
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
  
 0.942
ALP41749.1
Vibriobactin utilization protein ViuB.
 
  
 0.940
menF
Isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate.
  
  
 0.869
ALP41036.1
Muropeptide permease AmpG.
  
  
 0.759
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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