STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP40138.1Hypothetical protein. (112 aa)    
Predicted Functional Partners:
ALP42142.1
Hypothetical protein.
       0.693
ALP41372.1
DNA repair protein RadC.
       0.693
ALP43123.1
Hypothetical protein.
       0.488
ALP42760.1
Hypothetical protein.
       0.482
ALP41748.1
Hypothetical protein.
       0.473
ALP39666.1
Hypothetical protein.
       0.473
ALP43305.1
Hypothetical protein.
       0.473
ALP40292.1
Hypothetical protein.
       0.473
ALP42434.1
Hypothetical protein.
       0.436
ALP40795.1
Hypothetical protein.
       0.422
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.