STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP40145.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
ALP42161.1
Extracellular protease.
 
     0.667
ALP39563.1
Hypothetical protein.
  
     0.653
ALP41003.1
Membrane protein.
  
     0.595
ALP39675.1
Hypothetical protein.
  
     0.559
fklB
FKBP-type peptidyl-prolyl cis-trans isomerase.
       0.538
ALP39570.1
Hypothetical protein.
  
     0.463
nagK
NAGC-like transcriptional regulator.
 
     0.458
ALP42544.1
LuxR family transcriptional regulator.
  
     0.443
ALP43043.1
Hypothetical protein.
  
     0.436
cutC
Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family.
       0.413
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.