STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uhpBHistidine kinase. (501 aa)    
Predicted Functional Partners:
uhpA
DNA-binding response regulator in two-component regulatory system wtih UhpB.
 
 
  0.994
uhpC
Regulatory protein uhpC.
 
 
 0.982
narP
LuxR family DNA-binding response regulator.
 
 
   0.752
uvrY
Response regulator.
 
 
   0.744
ALP39623.1
Transcriptional regulator.
 
 
   0.713
agmR
Two component system response regulator, LuxR family protein.
 
 
   0.611
ALP41711.1
Hypothetical protein.
  
     0.556
rnk
Transcription elongation factor GreA/GreB.
       0.531
ALP43057.1
Hypothetical protein; Belongs to the UPF0253 family.
  
     0.451
ALP41152.1
AraC family transcriptional regulator.
  
     0.449
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.