Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tapBType IV-A pilus assembly ATPase PilB. (417 aa)    
Predicted Functional Partners:
tapC
Type 4 fimbrial assembly protein PilC.
 
 
 0.977
tapD
Methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.954
ALP43732.1
Hypothetical protein.
 
     0.923
exeF
General secretion pathway protein F.
 
 
 0.919
ALP43262.1
GspF family protein.
 
 
 0.919
ALP40336.1
Type II secretion system protein.
 
 
 0.919
exeL
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 
 0.845
exeG
General secretion pathway protein GspG.
 
 
 0.738
ALP42325.1
Pilus assembly protein PilM.
 
 
 
 0.723
xcpT
Type II secretion system protein G.
 
 
 0.713
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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