STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP40239.1ABC-type sugar transporter permease component; Belongs to the binding-protein-dependent transport system permease family. (170 aa)    
Predicted Functional Partners:
yufQ
ABC-type sugar transporter permease component.
  
  0.999
ALP39734.1
ABC-type sugar transporter permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
yufO
ABC transporter nucleotide binding/ATPase (sugar/ribonucleotide).
 
 
 0.997
ALP42867.1
Periplasmic component/surface lipoprotein.
 
 
 0.991
ALP42542.1
Hypothetical protein.
 
     0.885
rbsA
D-ribose transporter ATP binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
     0.464
mglA2
Sugar ABC transporter ATP-binding protein.
 
     0.443
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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