STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP40260.1CoA-disulfide reductase. (430 aa)    
Predicted Functional Partners:
fdx
Ferredoxin.
  
 
 0.824
nirD
Nitrite reductase.
 
 
 0.821
ALP41147.1
Cytochrome c-552.
   
 
 0.781
ALP43237.1
Cytochrome c553.
   
 
 0.781
cc4
Cytochrome C.
   
 
 0.781
ycbX
Flavodoxin reductase family 1 protein.
  
 
 0.754
hisI
Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; In the N-terminal section; belongs to the PRA-CH family.
  
    0.733
ALP43227.1
Iron-sulfur cluster-binding protein.
  
 
 0.732
rpmE
50S ribosomal protein L31; Binds the 23S rRNA.
   
    0.680
ALP43751.1
PTS beta-glucoside transporter subunit IIBC.
   
    0.680
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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