STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoRTwo component system senor histidine kinase PhoR. (435 aa)    
Predicted Functional Partners:
phoB
Phosphate regulon transcriptional regulatory protein PhoB.
 0.997
ALP43038.1
Hypothetical protein.
 
 0.859
ALP42447.1
Chemotaxis protein CheY.
 
0.798
arcA
Two-component response regulator.
 
 0.790
ompR-2
Winged helix family two component transcriptional regulator.
 
 0.788
ompR
Transcriptional regulator OmpR.
 
 0.776
ompR-3
Winged helix family two component transcriptional regulator.
 
 0.776
tctD
Transcriptional regulator.
 
 0.759
cpxR
Transcriptional regulatory protein CpxR.
 
 0.750
phoP
Two-component system responsse regulator PhoP.
 
 0.749
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.