Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
WL1483_94Fatty acid hydroxylase. (335 aa)    
Predicted Functional Partners:
ALP42953.1
Hypothetical protein.
   
    0.615
ALP39973.1
Hypothetical protein.
  
    0.599
yfcD
NUDIX hydrolase YfcD.
  
  
 0.577
rpsS
30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
    
   0.574
futA1
Iron binding protein FbpA.
      0.512
ALP40015.1
Regulatory protein CsrD.
   
    0.504
ALP40288.1
Sensory box/GGDEF domain/eal domain-containing protein.
   
    0.504
ubiF
2-octaprenyl-3-methyl-6-methoxy-1, 4-benzoquinol hydroxylase.
   
 
 0.450
ubiH
2-polyprenyl-6-methoxyphenol 4-hydroxylase.
   
 
 0.450
ubiI
2-octaprenyl-6-methoxyphenol hydroxylase.
   
 
 0.450
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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