STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP40384.1Polyphosphate kinase 2. (124 aa)    
Predicted Functional Partners:
ALP41574.1
Polyphosphate kinase 2.
     0.992
ALP41994.1
Hypothetical protein.
  
    0.735
ompW
Membrane protein.
   
    0.689
rdxA
Cytochrome c oxidase accessory protein CcoG.
   
    0.679
ompA-2
Outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
   
    0.567
ALP43198.1
Alpha/beta hydrolase.
       0.543
ALP39584.1
Cbb3-type cytochrome c oxidase subunit II.
   
    0.529
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
   
 0.510
hemN
Coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.505
ALP43324.1
Coproporphyrinogen III oxidase.
  
    0.505
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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