STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG28_067555,10-methylene tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)    
Predicted Functional Partners:
BG28_06760
Trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.859
BG28_12540
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.666
BG28_12670
Thioester reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.656
BG28_12520
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.587
BG28_12525
Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.576
BG28_08385
Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.543
BG28_12820
Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.534
BG28_03805
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
BG28_06765
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.513
BG28_03425
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.512
Your Current Organism:
Nesterenkonia sp. AN1
NCBI taxonomy Id: 652017
Other names: N. sp. AN1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.