STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG28_08005Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (234 aa)    
Predicted Functional Partners:
BG28_06785
Methenyltetrahydrofolate cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.903
BG28_02435
Formiminotransferase-cyclodeaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.894
BG28_00465
Phosphoribosylglycinamide formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.892
BG28_08000
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.774
BG28_08010
FmdB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.656
BG28_06780
Serine hydroxymethyltransferase; Catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.635
BG28_07995
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.595
BG28_08440
phenylalanyl-tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.570
BG28_03655
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.515
BG28_07150
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.515
Your Current Organism:
Nesterenkonia sp. AN1
NCBI taxonomy Id: 652017
Other names: N. sp. AN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.