Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BG28_08035Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
BG28_07230
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.475
BG28_01885
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
BG28_08045
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.473
BG28_01675
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.430
BG28_00835
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.426
BG28_01890
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.405
Your Current Organism:
Nesterenkonia sp. AN1
NCBI taxonomy Id: 652017
Other names: N. sp. AN1
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