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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG28_08065Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)    
Predicted Functional Partners:
BG28_05790
ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.743
BG28_07215
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.593
BG28_14260
Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.590
BG28_00650
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.586
BG28_01610
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.584
BG28_00400
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.577
BG28_00275
Peptidoglycan bridge formation protein FemAB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.559
BG28_05035
Cell wall biogenesis glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.557
BG28_02640
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.476
BG28_07840
Proteinase inhibitor I25 cystatin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
Your Current Organism:
Nesterenkonia sp. AN1
NCBI taxonomy Id: 652017
Other names: N. sp. AN1
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