BG28_08070 protein (Nesterenkonia sp. AN1) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Nesterenkonia sp. AN1

NCBI taxonomy Id: 652017
Other names: N. sp. AN1

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BG28_00695	BG28_07580	BG28_00695	BG28_07580	Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.716
BG28_00695	BG28_08070	BG28_00695	BG28_08070	Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aspartate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.787
BG28_00695	BG28_11760	BG28_00695	BG28_11760	Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.804
BG28_02890	BG28_02940	BG28_02890	BG28_02940	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
BG28_02890	BG28_03870	BG28_02890	BG28_03870	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.838
BG28_02890	BG28_08070	BG28_02890	BG28_08070	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aspartate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.771
BG28_02890	BG28_08300	BG28_02890	BG28_08300	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Argininosuccinate synthase; Catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.436
BG28_02890	BG28_10195	BG28_02890	BG28_10195	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.458
BG28_02890	BG28_11800	BG28_02890	BG28_11800	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoribosylformylglycinamidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.823
BG28_02940	BG28_02890	BG28_02940	BG28_02890	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
BG28_02940	BG28_03870	BG28_02940	BG28_03870	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
BG28_02940	BG28_08070	BG28_02940	BG28_08070	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aspartate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.771
BG28_02940	BG28_11800	BG28_02940	BG28_11800	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoribosylformylglycinamidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.823
BG28_03870	BG28_02890	BG28_03870	BG28_02890	Glutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.838
BG28_03870	BG28_02940	BG28_03870	BG28_02940	Glutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
BG28_03870	BG28_08070	BG28_03870	BG28_08070	Glutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aspartate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.806
BG28_03870	BG28_10195	BG28_03870	BG28_10195	Glutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.512
BG28_03870	BG28_11800	BG28_03870	BG28_11800	Glutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoribosylformylglycinamidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.821
BG28_07580	BG28_00695	BG28_07580	BG28_00695	Catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.716
BG28_07580	BG28_08070	BG28_07580	BG28_08070	Catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aspartate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835