Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BG28_08075Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (552 aa)    
Predicted Functional Partners:
BG28_09460
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
BG28_04820
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
BG28_11265
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
BG28_06940
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
BG28_13985
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
BG28_03645
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.769
BG28_03775
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.768
BG28_14065
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.761
BG28_00455
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.746
BG28_00650
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.733
Your Current Organism:
Nesterenkonia sp. AN1
NCBI taxonomy Id: 652017
Other names: N. sp. AN1
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