Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BG28_08080Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)    
Predicted Functional Partners:
BG28_08090
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.919
BG28_06440
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.829
BG28_06450
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.781
BG28_06455
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    0.780
BG28_06460
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.765
BG28_06445
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.615
BG28_08085
Phosphonomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.549
BG28_08075
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.481
Your Current Organism:
Nesterenkonia sp. AN1
NCBI taxonomy Id: 652017
Other names: N. sp. AN1
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