STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG28_10975Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)    
Predicted Functional Partners:
BG28_13295
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.862
BG28_10970
Sortase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.707
BG28_11345
Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.695
BG28_09540
Peptidase C60 sortase A and B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.693
BG28_05145
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.637
BG28_13360
Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.637
BG28_14410
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 
 0.612
BG28_06905
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.590
BG28_06110
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.580
BG28_08520
Glycosyl transferase family 9; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.580
Your Current Organism:
Nesterenkonia sp. AN1
NCBI taxonomy Id: 652017
Other names: N. sp. AN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.