STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG28_13125DNA repair protein RadA; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)    
Predicted Functional Partners:
BG28_14500
Recombinase RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.980
BG28_14495
RecX family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.973
BG28_06195
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.720
BG28_06200
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.720
BG28_06265
DNA/RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.672
BG28_13500
Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.666
BG28_13260
Excinuclease ABC subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.651
BG28_08245
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.620
BG28_13130
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.545
BG28_08255
RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.537
Your Current Organism:
Nesterenkonia sp. AN1
NCBI taxonomy Id: 652017
Other names: N. sp. AN1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.