STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG28_13415NADH-ubiquinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)    
Predicted Functional Partners:
BG28_13160
Pantoate--beta-alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.987
BG28_02945
3-methyl-2-oxobutanoate hydroxymethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.896
BG28_13420
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.872
BG28_13435
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.870
BG28_13425
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.853
BG28_13440
Dihydropteroate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.833
BG28_13430
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.807
BG28_13445
GTP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.747
BG28_00895
Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.500
BG28_13150
lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.465
Your Current Organism:
Nesterenkonia sp. AN1
NCBI taxonomy Id: 652017
Other names: N. sp. AN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.