STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU43621.1PFAM: BLUF domain protein; KEGG: met:M446_1828 BLUF domain-containing protein. (148 aa)    
Predicted Functional Partners:
ADU46182.1
KEGG: bbt:BBta_4427 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein.
  
 
 0.731
ADU43847.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; GAF domain protein; KEGG: bja:bll6545 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein.
  
 
 0.532
ADU43620.1
KEGG: bja:bll4036 hypothetical protein.
  
    0.481
ADU42759.1
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: bja:blr5269 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver.
  
 
 0.464
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
    0.455
ADU45441.1
TIGRFAM: diguanylate cyclase; hemerythrin-like metal-binding protein; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; Hemerythrin HHE cation binding domain protein; KEGG: rsq:Rsph17025_2184 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: GGDEF domain containing protein.
  
 
 0.455
ADU41774.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: bbt:BBta_0531 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; response regulator receiver.
  
 
 0.420
ADU42302.1
KEGG: bra:BRADO3478 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver.
  
 
 0.420
ADU45517.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; CHASE domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; KEGG: xal:XALc_1974 putative two-component system sensor-response regulator hybrid protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver.
  
 
 0.420
ADU42450.1
TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; KEGG: met:M446_6787 diguanylate cyclase/phosphodiesterase; SMART: GGDEF domain containing protein.
  
 
 0.416
Your Current Organism:
Rhodopseudomonas palustris DX1
NCBI taxonomy Id: 652103
Other names: R. palustris DX-1, Rhodopseudomonas palustris DX-1, Rhodopseudomonas palustris str. DX-1, Rhodopseudomonas palustris strain DX-1
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