A0A2C9JZY3 protein (Biomphalaria glabrata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2C9JZY3

Uncharacterized protein. (853 aa)

Predicted Functional Partners:

A0A2C9LAN6

0.748

A0A2C9JMA6

0.558

A0A2C9K6C0

0.556

A0A2C9K5N4

0.555

A0A2C9JQD0

0.510

A0A2C9JFZ0

0.488

A0A2C9KH64

0.481

A0A2C9KZE6

0.472

A0A2C9KB24

0.470

A0A2C9JKY8

0.466

Your Current Organism:

Biomphalaria glabrata

NCBI taxonomy Id: 6526
Other names: Australorbis glabratus, B. glabrata, Planorbis glabratus, bloodfluke planorb

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2C9JFZ0	A0A2C9JKY8	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.495
A0A2C9JFZ0	A0A2C9JQD0	Uncharacterized protein.	Uncharacterized protein.	0.933
A0A2C9JFZ0	A0A2C9JZY3	Uncharacterized protein.	Uncharacterized protein.	0.488
A0A2C9JFZ0	A0A2C9K5N4	Uncharacterized protein.	Uncharacterized protein.	0.995
A0A2C9JFZ0	A0A2C9K6C0	Uncharacterized protein.	SH3 domain-containing protein.	0.597
A0A2C9JFZ0	A0A2C9KH64	Uncharacterized protein.	ACB domain-containing protein.	0.548
A0A2C9JFZ0	A0A2C9KZE6	Uncharacterized protein.	Uncharacterized protein.	0.439
A0A2C9JFZ0	A0A2C9LAN6	Uncharacterized protein.	Uncharacterized protein.	0.597
A0A2C9JKY8	A0A2C9JFZ0	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	Uncharacterized protein.	0.495
A0A2C9JKY8	A0A2C9JZY3	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	Uncharacterized protein.	0.466
A0A2C9JMA6	A0A2C9JZY3	Uncharacterized protein; Belongs to the TUB family.	Uncharacterized protein.	0.558
A0A2C9JQD0	A0A2C9JFZ0	Uncharacterized protein.	Uncharacterized protein.	0.933
A0A2C9JQD0	A0A2C9JZY3	Uncharacterized protein.	Uncharacterized protein.	0.510
A0A2C9JQD0	A0A2C9K5N4	Uncharacterized protein.	Uncharacterized protein.	0.481
A0A2C9JZY3	A0A2C9JFZ0	Uncharacterized protein.	Uncharacterized protein.	0.488
A0A2C9JZY3	A0A2C9JKY8	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.466
A0A2C9JZY3	A0A2C9JMA6	Uncharacterized protein.	Uncharacterized protein; Belongs to the TUB family.	0.558
A0A2C9JZY3	A0A2C9JQD0	Uncharacterized protein.	Uncharacterized protein.	0.510
A0A2C9JZY3	A0A2C9K5N4	Uncharacterized protein.	Uncharacterized protein.	0.555
A0A2C9JZY3	A0A2C9K6C0	Uncharacterized protein.	SH3 domain-containing protein.	0.556