A0A2C9K952 protein (Biomphalaria glabrata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2C9K952

Uncharacterized protein. (235 aa)

Predicted Functional Partners:

A0A2C9L958

0.598

A0A2C9LQR1

0.598

A0A2C9LUN2

0.598

A0A2C9K4D9

0.552

A0A2C9KBY2

0.543

A0A2C9KFK2

0.543

A0A2C9K0D1

0.537

A0A2C9KYA5

0.528

A0A2C9JVD4

0.484

A0A2C9JLK2

0.480

Your Current Organism:

Biomphalaria glabrata

NCBI taxonomy Id: 6526
Other names: Australorbis glabratus, B. glabrata, Planorbis glabratus, bloodfluke planorb

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2C9JLK2	A0A2C9JVD4	Uncharacterized protein.	Uncharacterized protein.	0.953
A0A2C9JLK2	A0A2C9K4D9	Uncharacterized protein.	Aamy domain-containing protein.	0.998
A0A2C9JLK2	A0A2C9K952	Uncharacterized protein.	Uncharacterized protein.	0.480
A0A2C9JLK2	A0A2C9KBY2	Uncharacterized protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.994
A0A2C9JLK2	A0A2C9KFK2	Uncharacterized protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.994
A0A2C9JVD4	A0A2C9JLK2	Uncharacterized protein.	Uncharacterized protein.	0.953
A0A2C9JVD4	A0A2C9K4D9	Uncharacterized protein.	Aamy domain-containing protein.	0.978
A0A2C9JVD4	A0A2C9K952	Uncharacterized protein.	Uncharacterized protein.	0.484
A0A2C9JVD4	A0A2C9KBY2	Uncharacterized protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.833
A0A2C9JVD4	A0A2C9KFK2	Uncharacterized protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.833
A0A2C9K0D1	A0A2C9K952	Uncharacterized protein.	Uncharacterized protein.	0.537
A0A2C9K0D1	A0A2C9L958	Uncharacterized protein.	PRKCSH_1 domain-containing protein.	0.529
A0A2C9K0D1	A0A2C9LQR1	Uncharacterized protein.	Uncharacterized protein.	0.529
A0A2C9K0D1	A0A2C9LUN2	Uncharacterized protein.	Uncharacterized protein.	0.529
A0A2C9K4D9	A0A2C9JLK2	Aamy domain-containing protein.	Uncharacterized protein.	0.998
A0A2C9K4D9	A0A2C9JVD4	Aamy domain-containing protein.	Uncharacterized protein.	0.978
A0A2C9K4D9	A0A2C9K952	Aamy domain-containing protein.	Uncharacterized protein.	0.552
A0A2C9K4D9	A0A2C9KBY2	Aamy domain-containing protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.996
A0A2C9K4D9	A0A2C9KFK2	Aamy domain-containing protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.996
A0A2C9K4D9	A0A2C9KYA5	Aamy domain-containing protein.	Glyco_hydro_3 domain-containing protein.	0.574