A0A2C9KCI5 protein (Biomphalaria glabrata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2C9KCI5

Uncharacterized protein. (217 aa)

Predicted Functional Partners:

A0A2C9LST9

0.486

A0A2C9K4N5

0.462

A0A2C9K0F2

0.430

A0A2C9L4D8

0.430

A0A2C9L6K9

0.430

A0A2C9LET8

0.430

A0A2C9LHC1

0.430

A0A2C9LZF6

0.430

A0A2C9M0B7

0.430

A0A2C9M212

0.430

Your Current Organism:

Biomphalaria glabrata

NCBI taxonomy Id: 6526
Other names: Australorbis glabratus, B. glabrata, Planorbis glabratus, bloodfluke planorb

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2C9K0F2	A0A2C9KCI5	Uncharacterized protein.	Uncharacterized protein.	0.430
A0A2C9K0F2	A0A2C9L4D8	Uncharacterized protein.	DH domain-containing protein.	0.905
A0A2C9K0F2	A0A2C9M212	Uncharacterized protein.	Uncharacterized protein.	0.905
A0A2C9K4N5	A0A2C9KCI5	Uncharacterized protein.	Uncharacterized protein.	0.462
A0A2C9KCI5	A0A2C9K0F2	Uncharacterized protein.	Uncharacterized protein.	0.430
A0A2C9KCI5	A0A2C9K4N5	Uncharacterized protein.	Uncharacterized protein.	0.462
A0A2C9KCI5	A0A2C9L4D8	Uncharacterized protein.	DH domain-containing protein.	0.430
A0A2C9KCI5	A0A2C9L6K9	Uncharacterized protein.	DH domain-containing protein.	0.430
A0A2C9KCI5	A0A2C9LET8	Uncharacterized protein.	Protein kinase domain-containing protein.	0.430
A0A2C9KCI5	A0A2C9LHC1	Uncharacterized protein.	Ig-like domain-containing protein.	0.430
A0A2C9KCI5	A0A2C9LST9	Uncharacterized protein.	Uncharacterized protein.	0.486
A0A2C9KCI5	A0A2C9LZF6	Uncharacterized protein.	PH domain-containing protein.	0.430
A0A2C9KCI5	A0A2C9M0B7	Uncharacterized protein.	Uncharacterized protein.	0.430
A0A2C9KCI5	A0A2C9M212	Uncharacterized protein.	Uncharacterized protein.	0.430
A0A2C9L4D8	A0A2C9K0F2	DH domain-containing protein.	Uncharacterized protein.	0.905
A0A2C9L4D8	A0A2C9KCI5	DH domain-containing protein.	Uncharacterized protein.	0.430
A0A2C9L6K9	A0A2C9KCI5	DH domain-containing protein.	Uncharacterized protein.	0.430
A0A2C9LET8	A0A2C9KCI5	Protein kinase domain-containing protein.	Uncharacterized protein.	0.430
A0A2C9LET8	A0A2C9M0B7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.615
A0A2C9LET8	A0A2C9M212	Protein kinase domain-containing protein.	Uncharacterized protein.	0.505