STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9LZA4Uncharacterized protein. (243 aa)    
Predicted Functional Partners:
A0A2C9JX69
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.878
A0A2C9JW03
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
  
 0.876
A0A2C9JPF8
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 
 0.803
A0A2C9JCS1
Uncharacterized protein.
   
    0.778
A0A2C9LHW9
RRM domain-containing protein.
   
 
 0.755
A0A2C9LMU9
Uncharacterized protein.
   
    0.734
A0A2C9M2M2
Protein BCCIP homolog; Belongs to the BCP1 family.
   
    0.715
A0A2C9JKG2
Uncharacterized protein.
   
  
 0.694
A0A2C9JLB2
C2H2-type domain-containing protein.
   
  
 0.673
A0A2C9L7E3
WD_REPEATS_REGION domain-containing protein.
   
  
 0.673
Your Current Organism:
Biomphalaria glabrata
NCBI taxonomy Id: 6526
Other names: Australorbis glabratus, B. glabrata, Planorbis glabratus, bloodfluke planorb
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